R1b1c7 haplogroup M222 SNP aka North West Irish Variety, IMH and R1bSTR19Irish

 

John McEwan

 

20th May 2006

 

Background

M222 is a R1b1c subclade SNP first reported in 1999. Links to references about the SNP are available at the ISOGG SNP index along with its position in the R1b portion of the ISOGG tree. The SNP was tested in very few studies to define its prevalence and geographical spread. The exception was Cinnoglu et al 2004 who found no derived individuals in 523 individuals in Turkey. One reason for the lack of testing was that it had been spuriously associated with reduced fertility from the paper by Sun et al. 1999, which close reading does not support. In Feb 2006 the probable association of this SNP was made with the North West Irish Variety STR defined haplotype group, first identified by David Wilson in 2004, and subsequently separately and formally reported by Moore et al. 2006 who named it IMH or Irish Modal Haplotype.

 

This STR based group is the most divergent and distinct STR cluster in R1b and members of the cluster from the 37 FTDNA marker “phase 3” analysis using data extracted from Ysearch in August 2005 can be seen here (also named R1bSTR19Irish).  Its STR modal values have been estimated, as has its diversity and estimated age based on ASD measurements, and its geographic distribution.

 

Briefly it makes up around 20% of R1b of Irish origin and is also prevalent in western Scotland. The data of Moore et al. (2006) who used more restrictive criteria in defining the cluster suggested it is very prevalent in North West Ireland, and based on its association with surnames they demonstrated a significant association with Ui Neill descendants (these are descendants of Niall of the nine hostages an extremely famous Irish King of the 5th century AD). The cluster is about 46% of the age of R1b and is most likely at least 3400 years old based on extremely conservative assumptions. Much more has been written and speculated about this SNP on the Genealogy DNA listserver.

 

SNP testing to date has shown a remarkable correlation between M222+ individuals and the R1bSTR19Irish cluster, with 16 publicly positive individuals out of 47 tested all of which fall within this cluster. In fact they display almost identical properties to the R1bSTR19 cluster previously defined above. Around 40 negative results have been reported and they cover a major part of the balance of R1b. It is still possible that M222+ individuals exist outside of this cluster but they are rare.

 

Unfortunately, the various names for this group are used interchangeably when more caution should be exercised. The North West Irish Variety and R1bSTR19Irish are essentially equivalent, M222+ appears to date to also be largely equivalent as well, but a greater number of individuals need to be tested. The surname derived IMH of Moore et al (2006) in contrast is more difficult to compare unless additional testing is undertaken. However, it is likely to represent a smaller less diverse subgroup.

 

Data summary

To graphically display the results to date, 37 STR haplotypes of individuals who have also been SNP tested as either: R1b1c6 (SRY2627+), R1b1c7 (M222+), R1b1c9 (S21+), R1b1c10 (S28+) or R1b1c(xR1b1c6,R1b1c7,R1b1c9,R1b1c10) were joined with the  phase 3 modal haplotypes and the 184 individuals who were clustered within R1bSTR19Irish group in that analysis. These were then clustered using the same criteria as that analysis and the resulting tree is presented in the attached file.

 

Cluster diagram of SNP tested individuals, R1b modal haplotypes, and R1bSTR19Irish classified individuals.

 

Results

The most striking things about the results are:

·          All M222+ individuals fall within the R1bSTR19Irish defined group

·          Only one R1bSTR19Irish member did not cluster in this group in this analysis suggesting it may be improperly assigned.

·          The M222+ individuals are present in most of the major sub-branches of the R1bSTR19Irish cluster.

·          In contrast R1b1c6, R1b1c9 and R1b1c10 subclades are much less well defined by 37 STR markers, although R1b1c9 has several distinct groups.

 

 

References

Moore LT, McEvoy B, Cape E, Simms K, Bradley DG. 2006. A Y-Chromosome Signature of Hegemony in Gaelic Ireland. Am. J. Hum. Genet 78:334-8

 

Sun, C. , Skaletsky, H., Rozen, S., Gromoll, J., Nieschlag, E., Oates, R. & Page, D. C. 2000. Deletion of azoospermia factor a (AZFa) region of human Y chromosome caused by recombination between HERV15 proviruses. Hum. Mol. Biol. 9: 2291-2296.

 

Sun, C., Skaletsky, H. Birren, B., Devon K., Tang, Z., Silber, S., Oates R., Page, D.C. 1999. An azoospermic man with a de novo point mutation in the Y-chromosomal gene USP9Y. Nature Genetics 23: 429-432

 

UNDERHILL, P. A., PASSARINO, G., LIN, A. A., SHEN, P., MIRAZON LAHR, M., FOLEY, R. A., OEFNER P. J., CAVALLI-SFORZA, L. L. 2001. The phylogeography of Y chromosome binary haplotypes and the origins of modern human populations. Ann. Hum. Genet. 65: 43-62